Automate Machine Learning Tasks
An MCP server for automated machine learning: data analysis, preprocessing, model selection, and hyperparameter tuning.
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Why it matters
Streamline your machine learning projects with an intelligent platform for data analysis, preprocessing, model selection, and hyperparameter tuning.
Outcomes
What it gets done
Analyze dataset statistics and identify missing values.
Automate data preprocessing, including outlier handling and feature encoding.
Select, train, and evaluate multiple machine learning models.
Tune hyperparameters for optimal model performance.
Install
Add it to your toolbox
Run in your project directory:
curl -fsSL https://spark.entire.vc/get/vb-automl | bash Capabilities
Tools your agent gets
Provides detailed information about the data including statistics and missing values
Reads a CSV file
Visualizes correlation matrix for numerical columns
Visualizes correlation matrix for categorical columns
Visualizes correlation matrix after preprocessing
Visualizes outliers in the data
Visualizes outliers after preprocessing
Preprocesses data by removing outliers and filling missing values
Overview
AutoML MCP Server
An MCP server for automated machine learning - data analysis, preprocessing, multi-algorithm model training, evaluation, and hyperparameter tuning. Use it to run a full ML workflow from a CSV file conversationally through an LLM instead of hand-writing the pipeline.
What it does
This MCP server provides an intelligent automated machine learning platform covering data analysis, preprocessing, model selection, and hyperparameter tuning through MCP tools, letting an LLM run an ML workflow end to end from a CSV file. Data analysis tools give comprehensive dataset statistics (shape, memory usage, data types, missing values), read CSVs via pandas/pyarrow, visualize correlation matrices for numerical and categorical columns (before and after preprocessing), and visualize outliers. Preprocessing tools handle missing values, encode categorical variables, scale numerical features, and prepare data separately for regression or classification problems.
Model training supports many algorithms - for regression: Linear Regression, Ridge, Lasso, ElasticNet, Random Forest, XGBoost, SVR, KNN, and CatBoost; for classification: Logistic Regression, Ridge Classifier, Random Forest, XGBoost, SVM, KNN, Decision Tree, Naive Bayes, and CatBoost. Evaluation covers R-squared, MAE, and MSE for regression, and accuracy plus F1-score for classification, with confusion matrix visualization for classification problems and side-by-side model comparison. Hyperparameter tuning automates search over model parameters with configurable scoring metrics and a controllable number of optimization trials, and a dedicated tool tests a trained model against external data and returns predictions. A feature-importance tool analyzes which features matter most using XGBoost.
A typical workflow chains these tools: inspect the data, preprocess it, prepare features for the target problem type, train and evaluate models, visualize the resulting confusion matrix, then tune the best-performing model's hyperparameters. The project ships with sample Kaggle datasets (heart disease, salary, calorie, personality, and other prediction tasks) for testing the pipeline end to end.
When to use - and when NOT to
Use it when you want an LLM to drive a full automated ML workflow - exploring a dataset, cleaning and preparing it, training and comparing multiple models, and tuning the winner - without writing the scikit-learn/XGBoost/CatBoost boilerplate by hand.
Capabilities
Fifteen tools: seven for data analysis (information_about_data, reading_csv, visualize_correlation_num, visualize_correlation_cat, visualize_correlation_final, visualize_outliers, visualize_outliers_final), two for preprocessing (preprocessing_data, prepare_data), and six for model training and evaluation (models, visualize_accuracy_matrix, best_model_hyperparameter, test_external_data, predict_value, feature_importance_analysis).
How to install
Clone the repository and install dependencies (pip install -r requirements.txt), update the data directory path in utils/read_csv_file.py to match your local project location, then add it to Claude Desktop's configuration:
{
"mcpServers": {
"AutoML": {
"command": "uv",
"args": [
"--directory",
"C:\\YOUR\\PROJECT\\PATH\\AutoML",
"run",
"main.py"
]
}
}
}
Key dependencies include the MCP framework, pandas/pyarrow/numpy for data handling, and scikit-learn/XGBoost/LightGBM/CatBoost for modeling.
Who it's for
Data scientists and analysts who want to run exploratory analysis, preprocessing, model comparison, and hyperparameter tuning conversationally through an LLM instead of writing a full scikit-learn/XGBoost pipeline by hand. The project is released under the MIT License.
Source README
Auto ML - Automated Machine Learning Platform
An intelligent automated machine learning platform that provides comprehensive data analysis, preprocessing, model selection, and hyperparameter tuning capabilities through Model Context Protocol (MCP) tools.
🚀 Features
📊 Data Analysis & Exploration
- Data Information: Get comprehensive dataset statistics including shape, memory usage, data types, and missing values
- CSV Reading: Efficient CSV file reading with pandas and pyarrow support
- Correlation Analysis: Visualize correlation matrices for numerical and categorical variables
- Outlier Detection: Identify and visualize outliers in your datasets
🔧 Data Preprocessing
- Automated Preprocessing: Handle missing values, encode categorical variables, and scale numerical features
- Feature Engineering: Prepare features for both regression and classification problems
- Data Validation: Check for duplicates and data quality issues
🤖 Machine Learning Models
- Multiple Algorithms: Support for various ML algorithms including:
- Regression: Linear Regression, Ridge, Lasso, ElasticNet, Random Forest, XGBoost, SVR, KNN, CatBoost
- Classification: Logistic Regression, Ridge Classifier, Random Forest, XGBoost, SVM, KNN, Decision Tree, Naive Bayes, CatBoost
📈 Model Evaluation & Visualization
- Performance Metrics:
- Regression: R², MAE, MSE
- Classification: Accuracy, F1-Score
- Confusion Matrix Visualization: For classification problems
- Model Comparison: Compare multiple models side-by-side
⚙️ Hyperparameter Tuning
- Automated Tuning: Optimize model hyperparameters using advanced search algorithms
- Customizable Scoring: Choose from various evaluation metrics
- Trial Management: Control the number of optimization trials
📁 Project Structure
AutoML/
├── data/ # Sample datasets
│ ├── Ai.csv
│ ├── Calories.csv
│ ├── Cost.csv
│ ├── Digital.csv
│ ├── Electricity.csv
│ ├── ford.csv
│ ├── Habits.csv
│ ├── heart.csv
│ ├── Lifestyle.csv
│ ├── Mobiles.csv
│ ├── Personality.csv
│ ├── Salaries.csv
│ ├── Shopper.csv
│ ├── Sleep.csv
│ ├── cat.csv
│ ├── test.csv
│ └── train.csv
├── tools/
│ └── all_tools.py # MCP tool definitions
├── utils/
│ ├── before_model.py # Feature preparation
│ ├── details.py # Data information
│ ├── external_test.py # External data test with XGBoost
│ ├── feature_importance.py # Feature importance analysis
│ ├── hyperparameter.py # Hyperparameter tuning
│ ├── model_selection.py # Model selection and evaluation
│ ├── prediction.py # Prediction utilities
│ ├── preprocessing.py # Data preprocessing
│ ├── read_csv_file.py # CSV reading utilities
│ └── visualize_data.py # Visualization functions
├── main.py # Application entry point
├── server.py # MCP server configuration
├── requirements.txt # Python dependencies
└── README.md # This file
🛠️ Installation
Prerequisites
- Python 3.8 or higher
- pip or uv package manager
Setup
Clone the repository
git clone https://github.com/emircansoftware/AutoML.git cd AutoMLInstall dependencies
# Using pip pip install -r requirements.txt pip install uv
Using with Claude Desktop
1. Data Path Setting
In utils/read_csv_file.py, update the path variable to match your own project directory on your computer:
# Example:
path = r"C:\\YOUR\\PROJECT\\PATH\\AutoML\\data"
2. Claude Desktop Configuration
In Claude Desktop, add the following block to your claude_desktop_config.json file and adjust the paths to match your own system:
{
"mcpServers": {
"AutoML": {
"command": "uv",
"args": [
"--directory",
"C:\\YOUR\\PROJECT\\PATH\\AutoML",
"run",
"main.py"
]
}
}
}
You can now start your project from Claude Desktop.
📋 Dependencies
- MCP Framework:
mcp[cli]>=1.9.4- Model Context Protocol for tool integration - Data Processing:
pandas>=2.3.0,pyarrow>=20.0.0,numpy>=2.3.1 - Machine Learning:
scikit-learn>=1.3.0,xgboost>=2.0.0,lightgbm>=4.3.0 - Additional ML:
catboost(for CatBoost models)
🎯 Usage
Starting the MCP Server
from server import mcp
# Run the server
mcp.run()
Available Tools
The platform provides the following MCP tools:
Data Analysis Tools
information_about_data(file_name): Give detailed information about the datareading_csv(file_name): Read the csv filevisualize_correlation_num(file_name): Visualize the correlation matrix for numerical columnsvisualize_correlation_cat(file_name): Visualize the correlation matrix for categorical columnsvisualize_correlation_final(file_name, target_column): Visualize the correlation matrix after preprocessingvisualize_outliers(file_name): Visualize outliers in the datavisualize_outliers_final(file_name, target_column): Visualize outliers after preprocessing
Preprocessing Tools
preprocessing_data(file_name, target_column): Preprocess the data (remove outliers, fill nulls, etc.)prepare_data(file_name, target_column, problem_type): Prepare the data for models (encoding, scaling, etc.)
Model Training & Evaluation
models(problem_type, file_name, target_column): Select and evaluate models based on problem typevisualize_accuracy_matrix(file_name, target_column, problem_type): Visualize the confusion matrix for predictionsbest_model_hyperparameter(model_name, file_name, target_column, problem_type, n_trials, scoring, random_state): Tune the hyperparameters of the best modeltest_external_data(main_file_name, target_column, problem_type, test_file_name): Test external data with the best model and return predictionspredict_value(model_name, file_name, target_column, problem_type, n_trials, scoring, random_state, input): Predict the value of the target column for new inputfeature_importance_analysis(file_name, target_column, problem_type): Analyze the feature importance of the data using XGBoost
Example Workflow
# 1. Analyze your data
info = information_about_data("data/heart.csv")
# 2. Preprocess the data
preprocessed = preprocessing_data("data/heart.csv", "target")
# 3. Prepare features for classification
features = prepare_data("data/heart.csv", "target", "classification")
# 4. Train and evaluate models
results = models("classification", "data/heart.csv", "target")
# 5. Visualize results
confusion_matrix = visualize_accuracy_matrix("data/heart.csv", "target", "classification")
# 6. Optimize best model
best_model = best_model_hyperparameter("RandomForestClassifier", "data/heart.csv", "target", "classification", 100, "accuracy", 42)
📊 Sample Datasets (All CSV datasets are from Kaggle.)
The project includes various sample datasets for testing:
- heart.csv: Heart disease prediction dataset
- Salaries.csv: Salary prediction dataset
- Calories.csv: Calorie prediction dataset
- Personality.csv: Personality analysis dataset
- Digital.csv: Digital behavior dataset
- Lifestyle.csv: Lifestyle analysis dataset
- Mobiles.csv: Mobile phone dataset
- Habits.csv: Habit analysis dataset
- Sleep.csv: Sleep pattern dataset
- Cost.csv: Cost analysis dataset
- ford.csv: Ford car dataset
- Ai.csv: AI-related dataset
- cat.csv: Cat-related dataset
🔧 Configuration
Environment Variables
- Set your preferred random seed for reproducible results
- Configure MCP server settings in
server.py
Customization
- Add new ML algorithms in
utils/model_selection.py - Extend preprocessing steps in
utils/preprocessing.py - Create custom visualization functions in
utils/visualize_data.py
🤝 Contributing
We welcome contributions! Please feel free to submit a Pull Request. For major changes, please open an issue first to discuss what you would like to change.
📝 License
This project is licensed under the MIT License - see the LICENSE file for details.
🙏 Acknowledgments
- Model Context Protocol for the MCP framework
- scikit-learn for machine learning algorithms
- XGBoost for gradient boosting
- CatBoost for categorical boosting
- pandas for data manipulation
📞 Support
If you encounter any issues or have questions:
- Check the Issues page
- Create a new issue with detailed information
- Contact the maintainers
FAQ
Common questions
Discussion
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